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CDYL is a novel regulator of dendrite morphogenesis & Genome dominance in polyploids
Posted: Jun 04, 2014
Epigenetic regulation, including DNA methylation, histone modifications, and chromatin remodeling, play an important role in the nervous system. However, the role of epigenetic mechanisms contribute to dendrite morphogenesis is nearly unknown.ALK inhibitor
Dendritic arborization
Chromodomain Y-like (CDYL) protein, containing an N-terminal chromodomain has been implicated in transcription repression. CDYL connects the transcription repressor RE1- silencing transcription factor (REST) and the histone H3K9 methyltransferase G9a for repression of gene transcription.
This study report that CDYL is a negative regulator of dendrite branching. CDYL recruits the H3K27methyltransferase activity to the brain-derived neurotropic factor (BDNF) promoter to regulate gene transcription and, CDYL and EZH2 coordinately regulate dendrite morphogenesis. During KCl stimulation, Neuronal CDYL protein is rapidly degraded indicating that DabrafenibCDYL is an important regulator of dendrite morphogenesis in activity-dependent neuronal function. In cultured primary hippocampal neurons, overexpression of CDYL reduces the dendritic arborization and total dendritic branch length; on the other hand, knock-down of CDYL increases the dendritic complexity, which could be reduced by overexpression of a shRNA-resistant CDYL construct.
To summary, CDYL functions as a reader protein for histone modifications and participates in the establishment of the repressive histone methylation marks in chromatin. Furthermore, these mechanistic studies may offer better therapeutic opportunities for neurological diseases in the future.
Just as shown in the picture, whole-genome duplications (WGDs) have appeared in many eukaryotic lineages, particularly plants. The mechanism of fractionation is known for the most recent tetraploidy in the maize var. B73 lineage and the paleohexaploidy in the Brassica rapa.
The gene expression component of genome dominance is usually determined using RNA-sequencing (RNA-seq) data from the shoot, a particularly complex organ system composed of many organs. Among suitable plant polyploids with sequenced genomes, gene dominance is observed in B. rapa, but the RNA-seq data for B. rapa provide poor resolution.
This study assumed that genome dominance occurs because genes from different parental genomes brought their smRNA-modulated transposon islands (hetero-chromatin) along with them into the tetraploid. Ibrutinib Genome dominance, as defined by both fractionation and mRNA level differences in the tetraploid, once established, may be inherited and reinforced through subsequent polyploidies spanning.
To summary, there is a tendency for the genes on the dominant subgenome to become even more dominant after the second paleopolyploidy, Once genome dominance is established during the initial in breeding generations following the polyploidy event itself, genes on one subgenome tend to express less than genes on the other.
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